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  • Negative cofitness for Shew_1550 from Shewanella loihica PV-4

    FAD linked oxidase domain-containing protein (RefSeq)
    SEED: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_3439 type II secretion system protein (RefSeq) -0.66
    2 Shew_3759 imidazolonepropionase (RefSeq) -0.62
    3 Shew_3438 type IV-A pilus assembly ATPase PilB (RefSeq) -0.62
    4 Shew_0612 hypothetical protein (RefSeq) -0.61
    5 Shew_3437 O-antigen polymerase (RefSeq) -0.61
    6 Shew_1115 Beta-N-acetylhexosaminidase (RefSeq) -0.60
    7 Shew_2274 AAA ATPase (RefSeq) -0.59
    8 Shew_1106 type IV pilin biogenesis protein, putative (RefSeq) -0.58
    9 Shew_0470 MATE efflux family protein (RefSeq) -0.57
    10 Shew_3440 prepilin peptidase (RefSeq) -0.57
    11 Shew_3286 hypothetical protein (RefSeq) -0.57
    12 Shew_0383 malate dehydrogenase (RefSeq) -0.57
    13 Shew_2180 hypothetical protein (RefSeq) -0.55
    14 Shew_0653 LuxR family transcriptional regulator (RefSeq) -0.55
    15 Shew_1809 NAD-glutamate dehydrogenase (RefSeq) -0.55
    16 Shew_1625 L-serine dehydratase 1 (RefSeq) -0.55
    17 Shew_1105 type IV pilus assembly protein PilX (RefSeq) -0.55
    18 Shew_1885 hypothetical protein (RefSeq) -0.54
    19 Shew_2407 putative periplasmic protease (RefSeq) -0.53
    20 Shew_3630 bioH protein (RefSeq) -0.53

    Or look for positive cofitness