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  • Negative cofitness for Shew_1457 from Shewanella loihica PV-4

    response regulator receiver modulated CheW protein (RefSeq)
    SEED: Chemotaxis protein CheV (EC 2.7.3.-)
    KEGG: two-component system, chemotaxis family, response regulator CheV

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_3531 aromatic amino acid transporter (RefSeq) -0.48
    2 Shew_1935 hypothetical protein (RefSeq) -0.48
    3 Shew_0954 ROK family protein (RefSeq) -0.48
    4 Shew_0929 Ig family protein (RefSeq) -0.45
    5 Shew_2387 LysR family transcriptional regulator (RefSeq) -0.43
    6 Shew_0453 response regulator receiver protein (RefSeq) -0.42
    7 Shew_3099 TetR family transcriptional regulator (RefSeq) -0.42
    8 Shew_2745 hypothetical protein (RefSeq) -0.42
    9 Shew_2985 Sel1 domain-containing protein (RefSeq) -0.42
    10 Shew_2718 TonB-dependent receptor (RefSeq) -0.42
    11 Shew_0367 cytochrome-c oxidase (RefSeq) -0.42
    12 Shew_3768 hypothetical protein (RefSeq) -0.41
    13 Shew_1886 alpha amylase, catalytic region (RefSeq) -0.41
    14 Shew_2419 phosphohistidine phosphatase, SixA (RefSeq) -0.41
    15 Shew_3162 hypothetical protein (RefSeq) -0.40
    16 Shew_2388 formate/nitrite transporter (RefSeq) -0.39
    17 Shew_3166 extracellular solute-binding protein (RefSeq) -0.39
    18 Shew_R0033 tRNA-Arg (RefSeq) -0.38
    19 Shew_1611 sbcB exonuclease I (RefSeq) -0.38
    20 Shew_1801 putative solute/DNA competence effector (RefSeq) -0.37

    Or look for positive cofitness