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  • Negative cofitness for Shew_1407 from Shewanella loihica PV-4

    short-chain dehydrogenase/reductase SDR (RefSeq)
    SEED: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_2808 type IV pilus assembly PilZ (RefSeq) -0.67
    2 Shew_3381 diguanylate cyclase (RefSeq) -0.66
    3 Shew_2977 diguanylate cyclase (RefSeq) -0.65
    4 Shew_3380 TatD-related deoxyribonuclease (RefSeq) -0.65
    5 Shew_3683 extracellular solute-binding protein (RefSeq) -0.64
    6 Shew_1338 hypothetical protein (RefSeq) -0.64
    7 Shew_1681 diguanylate cyclase with PAS/PAC sensor (RefSeq) -0.63
    8 Shew_3379 hypothetical protein (RefSeq) -0.63
    9 Shew_2754 diguanylate cyclase (RefSeq) -0.63
    10 Shew_0391 TPR repeat-containing protein (RefSeq) -0.61
    11 Shew_1339 hypothetical protein (RefSeq) -0.60
    12 Shew_2988 putative signal transduction protein (RefSeq) -0.59
    13 Shew_0389 pilus (MSHA type) biogenesis protein MshL (RefSeq) -0.58
    14 Shew_0392 type II secretion system protein E (RefSeq) -0.58
    15 Shew_0400 methylation site containing protein (RefSeq) -0.57
    16 Shew_1337 hypothetical protein (RefSeq) -0.57
    17 Shew_2110 hypothetical protein (RefSeq) -0.57
    18 Shew_0386 fimbrial assembly family protein (RefSeq) -0.55
    19 Shew_0398 MSHA pilin protein MshC (RefSeq) -0.54
    20 Shew_0385 biogenesis protein MshI (RefSeq) -0.54

    Or look for positive cofitness