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  • Negative cofitness for Shew_1327 from Shewanella loihica PV-4

    hypothetical protein (RefSeq)
    SEED: FIG01062225: hypothetical protein

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_2754 diguanylate cyclase (RefSeq) -0.87
    2 Shew_3683 extracellular solute-binding protein (RefSeq) -0.84
    3 Shew_2977 diguanylate cyclase (RefSeq) -0.84
    4 Shew_3380 TatD-related deoxyribonuclease (RefSeq) -0.83
    5 Shew_2808 type IV pilus assembly PilZ (RefSeq) -0.82
    6 Shew_3381 diguanylate cyclase (RefSeq) -0.82
    7 Shew_3379 hypothetical protein (RefSeq) -0.81
    8 Shew_2988 putative signal transduction protein (RefSeq) -0.80
    9 Shew_0389 pilus (MSHA type) biogenesis protein MshL (RefSeq) -0.78
    10 Shew_0386 fimbrial assembly family protein (RefSeq) -0.78
    11 Shew_0391 TPR repeat-containing protein (RefSeq) -0.78
    12 Shew_0402 MSHA biogenesis protein MshQ (RefSeq) -0.77
    13 Shew_0392 type II secretion system protein E (RefSeq) -0.76
    14 Shew_1338 hypothetical protein (RefSeq) -0.76
    15 Shew_0306 diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) -0.76
    16 Shew_0385 biogenesis protein MshI (RefSeq) -0.75
    17 Shew_1681 diguanylate cyclase with PAS/PAC sensor (RefSeq) -0.75
    18 Shew_0401 MSHA biogenesis protein MshP (RefSeq) -0.74
    19 Shew_0393 type II secretion system protein (RefSeq) -0.74
    20 Shew_1339 hypothetical protein (RefSeq) -0.74

    Or look for positive cofitness