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  • Negative cofitness for Shew_1052 from Shewanella loihica PV-4

    GTP-binding protein LepA (RefSeq)
    SEED: Translation elongation factor LepA
    KEGG: GTP-binding protein LepA

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_3380 TatD-related deoxyribonuclease (RefSeq) -0.58
    2 Shew_2808 type IV pilus assembly PilZ (RefSeq) -0.56
    3 Shew_1681 diguanylate cyclase with PAS/PAC sensor (RefSeq) -0.55
    4 Shew_3381 diguanylate cyclase (RefSeq) -0.55
    5 Shew_1338 hypothetical protein (RefSeq) -0.54
    6 Shew_3379 hypothetical protein (RefSeq) -0.54
    7 Shew_2110 hypothetical protein (RefSeq) -0.51
    8 Shew_3683 extracellular solute-binding protein (RefSeq) -0.50
    9 Shew_1337 hypothetical protein (RefSeq) -0.49
    10 Shew_2754 diguanylate cyclase (RefSeq) -0.49
    11 Shew_2977 diguanylate cyclase (RefSeq) -0.48
    12 Shew_3541 thioesterase domain-containing protein (RefSeq) -0.46
    13 Shew_1339 hypothetical protein (RefSeq) -0.44
    14 Shew_1236 OsmC family protein (RefSeq) -0.44
    15 Shew_0229 extracellular solute-binding protein (RefSeq) -0.43
    16 Shew_1152 MscS mechanosensitive ion channel (RefSeq) -0.43
    17 Shew_1726 LuxR family transcriptional regulator (RefSeq) -0.42
    18 Shew_2988 putative signal transduction protein (RefSeq) -0.42
    19 Shew_1463 AraC family transcriptional regulator (RefSeq) -0.42
    20 Shew_0972 glutamate--ammonia ligase (RefSeq) -0.42

    Or look for positive cofitness