• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for Shew_1050 from Shewanella loihica PV-4

    sigma E regulatory protein, MucB/RseB (RefSeq)
    SEED: Sigma factor RpoE negative regulatory protein RseB precursor
    KEGG: sigma-E factor negative regulatory protein RseB

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_3693 ADP-heptose--lipooligosaccharide heptosyltransferase III (RefSeq) -0.42
    2 Shew_3697 glycosyl transferase family protein (RefSeq) -0.40
    3 Shew_3088 short chain fatty acid transporter (RefSeq) -0.40
    4 Shew_3757 urocanate hydratase (RefSeq) -0.38
    5 Shew_0226 hypothetical protein (RefSeq) -0.36
    6 Shew_3698 glycosyl transferase family protein (RefSeq) -0.36
    7 Shew_0701 hypothetical protein (RefSeq) -0.35
    8 Shew_0866 arginine repressor (RefSeq) -0.34
    9 Shew_2525 decaheme cytochrome c (RefSeq) -0.34
    10 Shew_1183 putative ABC transporter ATP-binding protein (RefSeq) -0.34
    11 Shew_3756 histidine ammonia-lyase (RefSeq) -0.33
    12 Shew_3638 envZ osmolarity sensor protein (RefSeq) -0.33
    13 Shew_3226 alkaline phosphatase (RefSeq) -0.33
    14 Shew_0994 KfrAs (RefSeq) -0.33
    15 Shew_0599 hypothetical protein (RefSeq) -0.32
    16 Shew_2588 putative lipoprotein (RefSeq) -0.32
    17 Shew_3414 hypothetical protein (RefSeq) -0.32
    18 Shew_0920 major facilitator transporter (RefSeq) -0.32
    19 Shew_3694 ADP-L-glycero-D-manno-heptose-6-epimerase (RefSeq) -0.32
    20 Shew_1082 hypothetical protein (RefSeq) -0.32

    Or look for positive cofitness