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  • Negative cofitness for Shew_1021 from Shewanella loihica PV-4

    peptidase M23B (RefSeq)
    SEED: Peptidase, M23/M37 family

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_2141 lytic murein transglycosylase (RefSeq) -0.50
    2 Shew_1630 transcription-repair coupling factor (RefSeq) -0.47
    3 Shew_3609 type II secretion system protein N (RefSeq) -0.44
    4 Shew_0386 fimbrial assembly family protein (RefSeq) -0.41
    5 Shew_0399 methylation site containing protein (RefSeq) -0.41
    6 Shew_0389 pilus (MSHA type) biogenesis protein MshL (RefSeq) -0.40
    7 Shew_0392 type II secretion system protein E (RefSeq) -0.39
    8 Shew_0393 type II secretion system protein (RefSeq) -0.39
    9 Shew_0391 TPR repeat-containing protein (RefSeq) -0.39
    10 Shew_0387 MSHA biogenesis protein MshJ (RefSeq) -0.38
    11 Shew_0398 MSHA pilin protein MshC (RefSeq) -0.38
    12 Shew_1009 peptidoglycan binding domain-containing protein (RefSeq) -0.38
    13 Shew_3285 hypothetical protein (RefSeq) -0.38
    14 Shew_0385 biogenesis protein MshI (RefSeq) -0.38
    15 Shew_0400 methylation site containing protein (RefSeq) -0.38
    16 Shew_0402 MSHA biogenesis protein MshQ (RefSeq) -0.37
    17 Shew_0108 polysaccharide deacetylase (RefSeq) -0.36
    18 Shew_1548 hypothetical protein (RefSeq) -0.35
    19 Shew_1005 rRNA (guanine-N(1)-)-methyltransferase (RefSeq) -0.34
    20 Shew_0457 ATP-dependent helicase HepA (RefSeq) -0.34

    Or look for positive cofitness