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  • Negative cofitness for Shew_0977 from Shewanella loihica PV-4

    FAD dependent oxidoreductase (RefSeq)
    SEED: Gamma-glutamyl-putrescine oxidase (EC1.4.3.-)
    KEGG: gamma-glutamylputrescine oxidase

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_3439 type II secretion system protein (RefSeq) -0.68
    2 Shew_0231 hypothetical protein (RefSeq) -0.63
    3 Shew_3440 prepilin peptidase (RefSeq) -0.61
    4 Shew_3438 type IV-A pilus assembly ATPase PilB (RefSeq) -0.60
    5 Shew_3757 urocanate hydratase (RefSeq) -0.60
    6 Shew_1397 amino acid/peptide transporter (RefSeq) -0.56
    7 Shew_1437 transcriptional regulator, TyrR (RefSeq) -0.56
    8 Shew_3756 histidine ammonia-lyase (RefSeq) -0.56
    9 Shew_0448 periplasmic solute binding protein (RefSeq) -0.55
    10 Shew_1026 cobalamin biosynthesis protein CbiB (RefSeq) -0.55
    11 Shew_1555 Glu/Leu/Phe/Val dehydrogenase, dimerisation region (RefSeq) -0.54
    12 Shew_0220 phosphoglycolate phosphatase (RefSeq) -0.54
    13 Shew_3437 O-antigen polymerase (RefSeq) -0.54
    14 Shew_2407 putative periplasmic protease (RefSeq) -0.52
    15 Shew_1657 sucC succinyl-CoA synthetase subunit beta (RefSeq) -0.52
    16 Shew_0023 protoporphyrinogen oxidase (RefSeq) -0.51
    17 Shew_1531 grxA glutaredoxin 1 (RefSeq) -0.51
    18 Shew_3759 imidazolonepropionase (RefSeq) -0.50
    19 Shew_3630 bioH protein (RefSeq) -0.49
    20 Shew_3372 arginase/agmatinase/formiminoglutamase (RefSeq) -0.49

    Or look for positive cofitness