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  • Negative cofitness for Shew_0945 from Shewanella loihica PV-4

    hypothetical protein (RefSeq)
    SEED: Putative inner membrane protein

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_1155 threonine aldolase (RefSeq) -0.41
    2 Shew_0453 response regulator receiver protein (RefSeq) -0.39
    3 Shew_3379 hypothetical protein (RefSeq) -0.39
    4 Shew_1726 LuxR family transcriptional regulator (RefSeq) -0.38
    5 Shew_2754 diguanylate cyclase (RefSeq) -0.38
    6 Shew_0306 diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) -0.37
    7 Shew_1480 hypothetical protein (RefSeq) -0.37
    8 Shew_1339 hypothetical protein (RefSeq) -0.37
    9 Shew_1466 hypothetical protein (RefSeq) -0.36
    10 Shew_2988 putative signal transduction protein (RefSeq) -0.35
    11 Shew_2977 diguanylate cyclase (RefSeq) -0.35
    12 Shew_2753 TPR repeat-containing protein (RefSeq) -0.35
    13 Shew_3380 TatD-related deoxyribonuclease (RefSeq) -0.34
    14 Shew_0401 MSHA biogenesis protein MshP (RefSeq) -0.33
    15 Shew_3381 diguanylate cyclase (RefSeq) -0.33
    16 Shew_0775 TetR family transcriptional regulator (RefSeq) -0.33
    17 Shew_1338 hypothetical protein (RefSeq) -0.33
    18 Shew_2162 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (RefSeq) -0.32
    19 Shew_0390 MSHA biogenesis protein MshM (RefSeq) -0.32
    20 Shew_2808 type IV pilus assembly PilZ (RefSeq) -0.31

    Or look for positive cofitness