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  • Negative cofitness for Shew_0942 from Shewanella loihica PV-4

    RDD domain-containing protein (RefSeq)
    SEED: FIG023103: Predicted transmembrane protein

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_0319 cyaA adenylate cyclase (RefSeq) -0.50
    2 Shew_2800 DEAD/DEAH box helicase domain-containing protein (RefSeq) -0.48
    3 Shew_3097 TonB-dependent siderophore receptor (RefSeq) -0.46
    4 Shew_0208 type IV pilus assembly protein PilM (RefSeq) -0.43
    5 Shew_1514 upp uracil phosphoribosyltransferase (RefSeq) -0.42
    6 Shew_1433 UDP-glucose 4-epimerase (RefSeq) -0.40
    7 Shew_3436 methylation site containing protein (RefSeq) -0.40
    8 Shew_1836 uracil-xanthine permease (RefSeq) -0.40
    9 Shew_0083 MOSC domain-containing protein (RefSeq) -0.39
    10 Shew_2189 alpha/beta hydrolase fold (RefSeq) -0.39
    11 Shew_3805 rhodanese domain-containing protein (RefSeq) -0.38
    12 Shew_2039 GCN5-related N-acetyltransferase (RefSeq) -0.37
    13 Shew_0748 acetyltransferase (RefSeq) -0.37
    14 Shew_0212 type IV pilus secretin PilQ (RefSeq) -0.37
    15 Shew_1113 tryptophan halogenase (RefSeq) -0.36
    16 Shew_0778 hypothetical protein (RefSeq) -0.36
    17 Shew_1103 type IV pilus modification protein PilV (RefSeq) -0.36
    18 Shew_1998 protein of unknown function UPF0052 and CofD (RefSeq) -0.36
    19 Shew_0271 phospholipase (RefSeq) -0.35
    20 Shew_3270 SSS family solute/sodium (Na+) symporter (RefSeq) -0.35

    Or look for positive cofitness