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  • Negative cofitness for Shew_0933 from Shewanella loihica PV-4

    methyltransferase type 11 (RefSeq)
    SEED: probable methyltransferase

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_3104 TetR family transcriptional regulator (RefSeq) -0.39
    2 Shew_1711 methyl-accepting chemotaxis protein (RefSeq) -0.38
    3 Shew_0124 cytochrome-c oxidase (RefSeq) -0.37
    4 Shew_1727 hypothetical protein (RefSeq) -0.34
    5 Shew_1430 hypothetical protein (RefSeq) -0.34
    6 Shew_3779 GntR family transcriptional regulator (RefSeq) -0.34
    7 Shew_0011 DNA-3-methyladenine glycosylase I (RefSeq) -0.32
    8 Shew_3053 Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) -0.30
    9 Shew_2962 malate dehydrogenase (RefSeq) -0.29
    10 Shew_1671 enoyl-CoA hydratase/isomerase (RefSeq) -0.29
    11 Shew_0119 hypothetical protein (RefSeq) -0.29
    12 Shew_0977 FAD dependent oxidoreductase (RefSeq) -0.29
    13 Shew_0584 hypothetical protein (RefSeq) -0.29
    14 Shew_1706 glutathione-dependent formaldehyde-activating, GFA (RefSeq) -0.28
    15 Shew_0765 acriflavin resistance protein (RefSeq) -0.28
    16 Shew_0043 hypothetical protein (RefSeq) -0.28
    17 Shew_0311 HlyD family type I secretion membrane fusion protein (RefSeq) -0.28
    18 Shew_3468 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) -0.28
    19 Shew_0122 cytochrome c oxidase, subunit III (RefSeq) -0.27
    20 Shew_2175 nhaB sodium/proton antiporter (RefSeq) -0.27

    Or look for positive cofitness