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  • Negative cofitness for Shew_0829 from Shewanella loihica PV-4

    LrgA family protein (RefSeq)
    SEED: Holin-like protein CidA
    KEGG: holin-like protein

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_0242 molydopterin dinucleotide-binding region (RefSeq) -0.36
    2 Shew_0023 protoporphyrinogen oxidase (RefSeq) -0.35
    3 Shew_1505 hypothetical protein (RefSeq) -0.34
    4 Shew_1058 holo-acyl-carrier-protein synthase (RefSeq) -0.34
    5 Shew_1812 23S rRNA m(2)G2445 methyltransferase (RefSeq) -0.34
    6 Shew_1514 upp uracil phosphoribosyltransferase (RefSeq) -0.33
    7 Shew_2390 formate acetyltransferase (RefSeq) -0.33
    8 Shew_3267 sodium/hydrogen exchanger (RefSeq) -0.32
    9 Shew_3647 hypothetical protein (RefSeq) -0.31
    10 Shew_0136 stearoyl-CoA 9-desaturase (RefSeq) -0.30
    11 Shew_1668 methylmalonate-semialdehyde dehydrogenase (RefSeq) -0.30
    12 Shew_0383 malate dehydrogenase (RefSeq) -0.30
    13 Shew_3802 hypothetical protein (RefSeq) -0.29
    14 Shew_1555 Glu/Leu/Phe/Val dehydrogenase, dimerisation region (RefSeq) -0.29
    15 Shew_2855 hypothetical protein (RefSeq) -0.29
    16 Shew_0671 phospholipase A(1) (RefSeq) -0.29
    17 Shew_3336 MarR family transcriptional regulator (RefSeq) -0.29
    18 Shew_2650 hypothetical protein (RefSeq) -0.29
    19 Shew_0945 hypothetical protein (RefSeq) -0.28
    20 Shew_0448 periplasmic solute binding protein (RefSeq) -0.28

    Or look for positive cofitness