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  • Negative cofitness for Shew_0654 from Shewanella loihica PV-4

    peptidase M16 domain-containing protein (RefSeq)
    SEED: FIG01060481: hypothetical protein

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_1770 nitrate reductase (RefSeq) -0.32
    2 Shew_1109 type IV pilus biogenesis protein, putative (RefSeq) -0.31
    3 Shew_1105 type IV pilus assembly protein PilX (RefSeq) -0.31
    4 Shew_0422 hypothetical protein (RefSeq) -0.30
    5 Shew_0992 BsuBIPstI restriction endonuclease domain-containing protein (RefSeq) -0.30
    6 Shew_3443 hypothetical protein (RefSeq) -0.29
    7 Shew_0609 two component LuxR family transcriptional regulator (RefSeq) -0.29
    8 Shew_3147 hypothetical protein (RefSeq) -0.29
    9 Shew_0128 HAD family hydrolase (RefSeq) -0.29
    10 Shew_3360 hypothetical protein (RefSeq) -0.28
    11 Shew_2423 hypothetical protein (RefSeq) -0.28
    12 Shew_2995 TonB family protein (RefSeq) -0.28
    13 Shew_0462 hypothetical protein (RefSeq) -0.28
    14 Shew_2748 PAS/PAC sensor signal transduction histidine kinase (RefSeq) -0.28
    15 Shew_2448 nrdG anaerobic ribonucleotide reductase-activating protein (RefSeq) -0.27
    16 Shew_0430 histone family protein DNA-binding protein (RefSeq) -0.27
    17 Shew_0677 hypothetical protein (RefSeq) -0.27
    18 Shew_1935 hypothetical protein (RefSeq) -0.27
    19 Shew_1659 ferredoxin-dependent glutamate synthase (RefSeq) -0.27
    20 Shew_3645 hypothetical protein (RefSeq) -0.27

    Or look for positive cofitness