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  • Negative cofitness for Shew_0505 from Shewanella loihica PV-4

    nitrite reductase (cytochrome; ammonia-forming) (RefSeq)
    SEED: Cytochrome c552 precursor (EC 1.7.2.2)
    KEGG:

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_0863 ABC transporter-related protein (RefSeq) -0.34
    2 Shew_1011 citrate transporter (RefSeq) -0.34
    3 Shew_3439 type II secretion system protein (RefSeq) -0.32
    4 Shew_1123 A/G-specific adenine glycosylase (RefSeq) -0.31
    5 Shew_1188 riboflavin synthase subunit alpha (RefSeq) -0.31
    6 Shew_3440 prepilin peptidase (RefSeq) -0.30
    7 Shew_0430 histone family protein DNA-binding protein (RefSeq) -0.30
    8 Shew_3110 hypothetical protein (RefSeq) -0.30
    9 Shew_1657 sucC succinyl-CoA synthetase subunit beta (RefSeq) -0.29
    10 Shew_1691 hypothetical protein (RefSeq) -0.29
    11 Shew_1819 GntR family transcriptional regulator (RefSeq) -0.29
    12 Shew_1106 type IV pilin biogenesis protein, putative (RefSeq) -0.29
    13 Shew_1104 prepilin-type cleavage/methylation-like protein (RefSeq) -0.28
    14 Shew_0470 MATE efflux family protein (RefSeq) -0.28
    15 Shew_2571 propionyl-CoA carboxylase (RefSeq) -0.28
    16 Shew_3582 hypothetical protein (RefSeq) -0.28
    17 Shew_1397 amino acid/peptide transporter (RefSeq) -0.28
    18 Shew_1076 Trp operon repressor (RefSeq) -0.28
    19 Shew_1885 hypothetical protein (RefSeq) -0.28
    20 Shew_3437 O-antigen polymerase (RefSeq) -0.28

    Or look for positive cofitness