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  • Negative cofitness for Shew_0451 from Shewanella loihica PV-4

    hypothetical protein (RefSeq)
    SEED: Ribonuclease E inhibitor RraB
    KEGG: hypothetical protein

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_2808 type IV pilus assembly PilZ (RefSeq) -0.63
    2 Shew_3683 extracellular solute-binding protein (RefSeq) -0.61
    3 Shew_1681 diguanylate cyclase with PAS/PAC sensor (RefSeq) -0.60
    4 Shew_3380 TatD-related deoxyribonuclease (RefSeq) -0.59
    5 Shew_3379 hypothetical protein (RefSeq) -0.58
    6 Shew_1152 MscS mechanosensitive ion channel (RefSeq) -0.58
    7 Shew_3381 diguanylate cyclase (RefSeq) -0.58
    8 Shew_1434 UTP-glucose-1-phosphate uridylyltransferase GalU (RefSeq) -0.56
    9 Shew_0970 XRE family transcriptional regulator (RefSeq) -0.56
    10 Shew_1338 hypothetical protein (RefSeq) -0.55
    11 Shew_1201 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) -0.55
    12 Shew_2754 diguanylate cyclase (RefSeq) -0.54
    13 Shew_2158 gamma-glutamyltransferase (RefSeq) -0.54
    14 Shew_0972 glutamate--ammonia ligase (RefSeq) -0.52
    15 Shew_2110 hypothetical protein (RefSeq) -0.52
    16 Shew_0392 type II secretion system protein E (RefSeq) -0.52
    17 Shew_0391 TPR repeat-containing protein (RefSeq) -0.50
    18 Shew_2977 diguanylate cyclase (RefSeq) -0.50
    19 Shew_3428 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) -0.50
    20 Shew_1337 hypothetical protein (RefSeq) -0.49

    Or look for positive cofitness