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  • Negative cofitness for Shew_0446 from Shewanella loihica PV-4

    hypothetical protein (RefSeq)
    SEED: FIG01058138: hypothetical protein

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_1092 amino acid carrier protein (RefSeq) -0.36
    2 Shew_2188 long-chain-fatty-acid--CoA ligase (RefSeq) -0.33
    3 Shew_0430 histone family protein DNA-binding protein (RefSeq) -0.32
    4 Shew_1685 collagenase (RefSeq) -0.32
    5 Shew_0553 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) -0.31
    6 Shew_3437 O-antigen polymerase (RefSeq) -0.31
    7 Shew_2110 hypothetical protein (RefSeq) -0.30
    8 Shew_1519 hypothetical protein (RefSeq) -0.29
    9 Shew_3379 hypothetical protein (RefSeq) -0.29
    10 Shew_3742 flagellar basal body-associated protein FliL-like protein (RefSeq) -0.29
    11 Shew_0905 response regulator receiver protein (RefSeq) -0.29
    12 Shew_0196 redoxin domain-containing protein (RefSeq) -0.28
    13 Shew_3292 hypothetical protein (RefSeq) -0.28
    14 Shew_3427 patatin (RefSeq) -0.28
    15 Shew_3439 type II secretion system protein (RefSeq) -0.28
    16 Shew_2135 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor (RefSeq) -0.27
    17 Shew_3819 MerR family transcriptional regulator (RefSeq) -0.27
    18 Shew_3436 methylation site containing protein (RefSeq) -0.27
    19 Shew_0914 NADPH-dependent FMN reductase (RefSeq) -0.27
    20 Shew_1531 grxA glutaredoxin 1 (RefSeq) -0.27

    Or look for positive cofitness