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  • Negative cofitness for Shew_0121 from Shewanella loihica PV-4

    hypothetical protein (RefSeq)
    SEED: FIG01056755: hypothetical protein

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_2641 PTS system, glucose-like IIB subunint (RefSeq) -0.38
    2 Shew_2435 sodium/proline symporter (RefSeq) -0.33
    3 Shew_1274 diguanylate cyclase (RefSeq) -0.31
    4 Shew_1084 PAS/PAC sensor hybrid histidine kinase (RefSeq) -0.31
    5 Shew_0575 glutamine amidotransferase of anthranilate synthase (RefSeq) -0.30
    6 Shew_1236 OsmC family protein (RefSeq) -0.30
    7 Shew_1517 putative adenylyl cyclase CyaB (RefSeq) -0.29
    8 Shew_2613 integral membrane sensor hybrid histidine kinase (RefSeq) -0.29
    9 Shew_0069 hypothetical protein (RefSeq) -0.29
    10 Shew_2491 methionine gamma-lyase (RefSeq) -0.28
    11 Shew_2242 dihydrouridine synthase, DuS (RefSeq) -0.28
    12 Shew_1481 short-chain dehydrogenase/reductase SDR (RefSeq) -0.28
    13 Shew_0814 pseudouridine synthase (RefSeq) -0.28
    14 Shew_2701 hypothetical protein (RefSeq) -0.27
    15 Shew_3244 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) -0.27
    16 Shew_2543 glyoxalase family protein (RefSeq) -0.27
    17 Shew_1515 Na+/H+ antiporter NhaC (RefSeq) -0.26
    18 Shew_1339 hypothetical protein (RefSeq) -0.26
    19 Shew_2977 diguanylate cyclase (RefSeq) -0.25
    20 Shew_1338 hypothetical protein (RefSeq) -0.25

    Or look for positive cofitness