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  • Negative cofitness for Shew_0073 from Shewanella loihica PV-4

    coproporphyrinogen III oxidase (RefSeq)
    SEED: Oxygen-independent coproporphyrinogen III oxidase, putative
    KEGG:

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_1339 hypothetical protein (RefSeq) -0.62
    2 Shew_3381 diguanylate cyclase (RefSeq) -0.57
    3 Shew_1338 hypothetical protein (RefSeq) -0.57
    4 Shew_2808 type IV pilus assembly PilZ (RefSeq) -0.56
    5 Shew_3380 TatD-related deoxyribonuclease (RefSeq) -0.55
    6 Shew_2977 diguanylate cyclase (RefSeq) -0.55
    7 Shew_2110 hypothetical protein (RefSeq) -0.54
    8 Shew_2754 diguanylate cyclase (RefSeq) -0.53
    9 Shew_1337 hypothetical protein (RefSeq) -0.53
    10 Shew_2988 putative signal transduction protein (RefSeq) -0.52
    11 Shew_0306 diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) -0.50
    12 Shew_3379 hypothetical protein (RefSeq) -0.46
    13 Shew_0453 response regulator receiver protein (RefSeq) -0.45
    14 Shew_1726 LuxR family transcriptional regulator (RefSeq) -0.44
    15 Shew_2718 TonB-dependent receptor (RefSeq) -0.44
    16 Shew_1681 diguanylate cyclase with PAS/PAC sensor (RefSeq) -0.42
    17 Shew_2388 formate/nitrite transporter (RefSeq) -0.42
    18 Shew_2753 TPR repeat-containing protein (RefSeq) -0.42
    19 Shew_3742 flagellar basal body-associated protein FliL-like protein (RefSeq) -0.38
    20 Shew_3683 extracellular solute-binding protein (RefSeq) -0.38

    Or look for positive cofitness