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  • Negative cofitness for Shew_0025 from Shewanella loihica PV-4

    protoporphyrinogen oxidase (RefSeq)
    SEED: Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
    KEGG: protoporphyrinogen oxidase

    Computing cofitness values with 160 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Shew_3324 hypothetical protein (RefSeq) -0.39
    2 Shew_2595 hypothetical protein (RefSeq) -0.36
    3 Shew_0494 hypothetical protein (RefSeq) -0.32
    4 Shew_3078 Ppx/GppA phosphatase (RefSeq) -0.32
    5 Shew_2136 carboxylesterase (RefSeq) -0.32
    6 Shew_3339 glutathione-dependent formaldehyde-activating, GFA (RefSeq) -0.31
    7 Shew_3649 hypothetical protein (RefSeq) -0.31
    8 Shew_3758 histidine utilization repressor (RefSeq) -0.31
    9 Shew_0420 major facilitator transporter (RefSeq) -0.30
    10 Shew_2756 xni exonuclease IX (RefSeq) -0.30
    11 Shew_1759 hydrogenase accessory protein HypB (RefSeq) -0.29
    12 Shew_2528 transcriptional regulator, CdaR (RefSeq) -0.29
    13 Shew_1696 hypothetical protein (RefSeq) -0.28
    14 Shew_2973 endothelin-converting protein 1 (RefSeq) -0.28
    15 Shew_3770 Sel1 domain-containing protein (RefSeq) -0.28
    16 Shew_1463 AraC family transcriptional regulator (RefSeq) -0.27
    17 Shew_1487 hypothetical protein (RefSeq) -0.27
    18 Shew_1152 MscS mechanosensitive ion channel (RefSeq) -0.27
    19 Shew_3188 aromatic amino acid permease (RefSeq) -0.27
    20 Shew_2195 NADH dehydrogenase (RefSeq) -0.27

    Or look for positive cofitness