Negative cofitness for BT4776 from Bacteroides thetaiotaomicron VPI-5482

conserved protein found in conjugate transposon (NCBI ptt file)
SEED: Conjugative transposon protein TraK

Computing cofitness values with 868 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	BT2675		hypothetical protein (NCBI ptt file)	-0.34
2	BT2383		RNA polymerase ECF-type sigma factor (NCBI ptt file)	-0.34
3	BT3007		D-alanyl-D-alanine dipeptidase (NCBI ptt file)	-0.33
4	BT2394		conserved hypothetical protein, putative outer membrane protein (NCBI ptt file)	-0.33
5	p5482_35		hypothetical protein (NCBI)	-0.32
6	BT3602		hypothetical protein (NCBI ptt file)	-0.32
7	BT0902		hypothetical protein (NCBI ptt file)	-0.31
8	p5482_38		DNA primase (NCBI)	-0.30
9	BT2372		transcriptional regulator (NCBI ptt file)	-0.30
10	BT2171		putative anti-sigma factor (NCBI ptt file)	-0.30
11	BT3163		alpha-glucosidase, putative (NCBI ptt file)	-0.30
12	p5482_24		hypothetical protein (NCBI)	-0.29
13	BT3788		TonB-dependent receptor for alpha-mannan (SusC-like) (from data)	-0.29
14	BT2393		putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)	-0.29
15	BT3790		hypothetical protein (NCBI ptt file)	-0.29
16	BT4258		putative 5-formyltetrahydrofolate cyclo-ligase (NCBI ptt file)	-0.28
17	BT4081		putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)	-0.28
18	BT3417		hypothetical protein (NCBI ptt file)	-0.28
19	BT2503		hypothetical protein (NCBI ptt file)	-0.28
20	BT2824		beta-glucanase precursor (NCBI ptt file)	-0.27

Or look for positive cofitness