Negative cofitness for BT3518 from Bacteroides thetaiotaomicron VPI-5482

putative anti-sigma factor (NCBI ptt file)
SEED: putative anti-sigma factor

Computing cofitness values with 1021 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	BT2793		bile salt tripartite efflux system, inner membrane component (from data)	-0.24
2	BT2792		regulator of the bile salt efflux system (from data)	-0.23
3	BT0690		two-component system response regulator (NCBI ptt file)	-0.21
4	BT1533		conserved hypothetical protein (NCBI ptt file)	-0.21
5	BT1532		ABC transporter permease (NCBI ptt file)	-0.20
6	BT1529		two-component system response regulator (NCBI ptt file)	-0.20
7	BT4643		RNA polymerase ECF-type sigma factor (NCBI ptt file)	-0.20
8	BT1670		putative transmembrane transport protein (NCBI ptt file)	-0.19
9	BT2477		conserved hypothetical protein (NCBI ptt file)	-0.19
10	BT2172		putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file)	-0.18
11	BT4206		UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (NCBI ptt file)	-0.18
12	BT2154		putative long-chain-fatty-acid--CoA ligase (NCBI ptt file)	-0.18
13	BT0052		hypothetical protein (NCBI ptt file)	-0.18
14	BT2794		bile salt tripartite efflux system, membrane fusion component (from data)	-0.18
15	BT2973		transcriptional regulator (NCBI ptt file)	-0.18
16	BT2121		putative Na+-driven multidrug efflux pump (NCBI ptt file)	-0.18
17	p5482_03		hypothetical protein (NCBI)	-0.18
18	BT1894		TPR-repeat-containing proteins (NCBI ptt file)	-0.18
19	BT4187		exo-alpha-D-galacturonosidase for catabolism of rhamnogalacturonan I and polygalacturonate (from data)	-0.18
20	BT1393		4-carboxymuconolactone decarboxylase (NCBI ptt file)	-0.18

Or look for positive cofitness