Negative cofitness for SO3117 from Shewanella oneidensis MR-1

thioredoxin, putative (NCBI ptt file)
SEED: Membrane protein, suppressor for copper-sensitivity ScsD

Computing cofitness values with 270 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	SO0183		acetyltransferase, GNAT family (NCBI ptt file)	-0.34
2	SO3221	fliM	flagellar motor switch protein FliM (NCBI ptt file)	-0.31
3	SO3229	fliE	flagellar hook-basal body complex protein FliE (NCBI ptt file)	-0.30
4	SO1260		hypothetical amino acid ABC transporter (NCBI ptt file)	-0.29
5	SO2698		prophage MuSo2, DNA circulation protein, putative (NCBI ptt file)	-0.29
6	SO3218	fliP	flagellar biosynthetic protein FliP (NCBI ptt file)	-0.29
7	SO4387		sensor histidine kinase (NCBI ptt file)	-0.29
8	SO3228	fliF	flagellar M-ring protein FliF (NCBI ptt file)	-0.28
9	SO3217	fliQ	flagellar biosynthetic protein FliQ (NCBI ptt file)	-0.28
10	SO2689		conserved hypothetical protein (NCBI ptt file)	-0.27
11	SO2245	dnaQ-1	DNA polymerase III, epsilon subunit (NCBI ptt file)	-0.27
12	SO2178	ccpA	cytochrome c551 peroxidase (NCBI ptt file)	-0.27
13	SO1908		hypothetical protein (NCBI ptt file)	-0.27
14	SO4358	dmaA-2	anaerobic dimethyl sulfoxide reductase, A subunit (NCBI ptt file)	-0.27
15	SO3489		GGDEF domain protein (NCBI ptt file)	-0.27
16	SO3248	flgD	basal-body rod modification protein FlgD (NCBI ptt file)	-0.26
17	SO3227	fliG	flagellar motor switch protein FliG (NCBI ptt file)	-0.26
18	SO4524		transcriptional regulator, LysR family (NCBI ptt file)	-0.26
19	SO_0376		no description	-0.26
20	SO3213	flhA	flagellar biosynthesis protein FlhA (NCBI ptt file)	-0.26

Or look for positive cofitness