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  • Negative cofitness for SO3102 from Shewanella oneidensis MR-1

    AcrA/AcrE family protein (NCBI ptt file)
    SEED: Membrane-fusion protein

    Computing cofitness values with 270 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 SO1260 hypothetical amino acid ABC transporter (NCBI ptt file) -0.47
    2 SOA0109 hypothetical protein (NCBI ptt file) -0.41
    3 SO3252 cheV-3 chemotaxis protein CheV (NCBI ptt file) -0.41
    4 SO4322 conserved hypothetical protein (NCBI ptt file) -0.40
    5 SO4711 HD domain protein (NCBI ptt file) -0.40
    6 SO3577 clpB clpB protein (NCBI ptt file) -0.39
    7 SO4321 OmpA family protein (NCBI ptt file) -0.39
    8 SO0141 sensory box protein (NCBI ptt file) -0.39
    9 SO3251 cheR-2 chemotaxis protein methyltransferase CheR (NCBI ptt file) -0.37
    10 SO1208 GGDEF domain protein (NCBI ptt file) -0.37
    11 SO2959 hypothetical protein (NCBI ptt file) -0.37
    12 SO1500 sensory box protein (NCBI ptt file) -0.35
    13 SO3714 sugar-binding protein, putative (NCBI ptt file) -0.35
    14 SO1160 rimI ribosomal-protein-alanine acetyltransferase (NCBI ptt file) -0.34
    15 SO4731 add Adenosine deaminase (EC 3.5.4.4) (from data) -0.34
    16 SO3350 pilU twitching motility protein PilU (NCBI ptt file) -0.33
    17 SO4011 conserved hypothetical protein (NCBI ptt file) -0.33
    18 SO2976 conserved hypothetical protein (NCBI ptt file) -0.32
    19 SO2975 hypothetical protein (NCBI ptt file) -0.32
    20 SO2970 hypothetical protein (NCBI ptt file) -0.31

    Or look for positive cofitness