Negative cofitness for SO3006 from Shewanella oneidensis MR-1

prophage LambdaSo, type II DNA modification methyltransferase, putative (NCBI ptt file)
SEED: Modification methylase (EC 2.1.1.37)
KEGG: DNA (cytosine-5-)-methyltransferase

Computing cofitness values with 270 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	SO3462	recN	DNA repair protein RecN (NCBI ptt file)	-0.57
2	SO4241	recQ	ATP-dependent DNA helicase RecQ (NCBI ptt file)	-0.50
3	SO3294	xseA	exodeoxyribonuclease VII, large subunit (NCBI ptt file)	-0.49
4	SO0952	recJ	single-stranded-DNA-specific exonuclease RecJ (NCBI ptt file)	-0.41
5	SO1861	uvrC	excinuclease ABC, C subunit (NCBI ptt file)	-0.40
6	SO2744		DNA damage response helicase (yejH or radD) (from data)	-0.38
7	SO2015	recR	recombination protein RecR (NCBI ptt file)	-0.38
8	SO3430	recA	recA protein (NCBI ptt file)	-0.36
9	SO1226	radA	DNA repair protein RadA (NCBI ptt file)	-0.36
10	SO3829		conserved hypothetical protein (NCBI ptt file)	-0.35
11	SO2844		exonuclease SbcD, putative (NCBI ptt file)	-0.34
12	SO4064		mcbg protein, putative (NCBI ptt file)	-0.34
13	SO0467	uvrD	DNA helicase II (NCBI ptt file)	-0.34
14	SO3055	pip	proline iminopeptidase (NCBI ptt file)	-0.32
15	SO2860		thiol:disulfide interchange protein, DsbA family (NCBI ptt file)	-0.32
16	SO1350	recO	DNA repair protein RecO (NCBI ptt file)	-0.32
17	SO4030	uvrA	excinuclease ABC, A subunit (NCBI ptt file)	-0.32
18	SO2075		hypothetical protein (NCBI ptt file)	-0.31
19	SO3045		hypothetical protein (NCBI ptt file)	-0.31
20	SO3169		transcriptional regulator, Cro/CI family (NCBI ptt file)	-0.30

Or look for positive cofitness