Negative cofitness for SO2681 from Shewanella oneidensis MR-1

prophage MuSo2, F protein, putative (NCBI ptt file)
SEED: Phage (Mu-like) virion morphogenesis protein

Computing cofitness values with 270 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	SO4241	recQ	ATP-dependent DNA helicase RecQ (NCBI ptt file)	-0.59
2	SO1861	uvrC	excinuclease ABC, C subunit (NCBI ptt file)	-0.56
3	SO2015	recR	recombination protein RecR (NCBI ptt file)	-0.54
4	SO3462	recN	DNA repair protein RecN (NCBI ptt file)	-0.53
5	SO0952	recJ	single-stranded-DNA-specific exonuclease RecJ (NCBI ptt file)	-0.48
6	SO1226	radA	DNA repair protein RadA (NCBI ptt file)	-0.46
7	SO4030	uvrA	excinuclease ABC, A subunit (NCBI ptt file)	-0.45
8	SO2506	uvrB	excinuclease ABC, B subunit (NCBI ptt file)	-0.43
9	SO3430	recA	recA protein (NCBI ptt file)	-0.41
10	SO1350	recO	DNA repair protein RecO (NCBI ptt file)	-0.34
11	SO3829		conserved hypothetical protein (NCBI ptt file)	-0.34
12	SO0467	uvrD	DNA helicase II (NCBI ptt file)	-0.33
13	SO2790	sbcB	exodeoxyribonuclease I (NCBI ptt file)	-0.33
14	SO3830		conserved hypothetical protein (NCBI ptt file)	-0.29
15	SO2654		transposase, putative (NCBI ptt file)	-0.28
16	SO2255	mfd	transcription-repair coupling factor (NCBI ptt file)	-0.28
17	SO2655		prophage MuSo2, DNA transposition protein, putative (NCBI ptt file)	-0.27
18	SO4283		apbE family protein (NCBI ptt file)	-0.27
19	SO2744		DNA damage response helicase (yejH or radD) (from data)	-0.27
20	SO1796	lon	ATP-dependent protease La (NCBI ptt file)	-0.27

Or look for positive cofitness