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  • Negative cofitness for SO2464 from Shewanella oneidensis MR-1

    surface protein, putative (NCBI ptt file)
    SEED: Dihydrolipoamide dehydrogenase (EC 1.8.1.4)

    Computing cofitness values with 270 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 SO0417 pilin, putative (NCBI ptt file) -0.36
    2 SO4289 pstB-2 phosphate ABC transporter, ATP-binding protein (NCBI ptt file) -0.36
    3 SO3525 type IV pilin biogenesis protein, putative (NCBI ptt file) -0.34
    4 SO1077 hypothetical protein (NCBI ptt file) -0.34
    5 SO2540 response regulator (NCBI ptt file) -0.32
    6 SO4068 hypothetical protein (NCBI ptt file) -0.32
    7 SO4286 motB chemotaxis motB protein (NCBI ptt file) -0.32
    8 SO3830 conserved hypothetical protein (NCBI ptt file) -0.32
    9 SO3994 hypothetical protein (NCBI ptt file) -0.32
    10 SO2799 lipoprotein, putative (NCBI ptt file) -0.31
    11 SO4287 motA chemotaxis motA protein (NCBI ptt file) -0.31
    12 SO3993 hypothetical protein (NCBI ptt file) -0.31
    13 SO0163 hslO chaperonin HslO (NCBI ptt file) -0.31
    14 SO3523 hypothetical protein (NCBI ptt file) -0.30
    15 SO3871 thiol:disulfide interchange protein, DsbA family (NCBI ptt file) -0.30
    16 SO0710 hypothetical protein (NCBI ptt file) -0.30
    17 SO1081 hypothetical protein (NCBI ptt file) -0.30
    18 SO3874 transcriptional regulator, LysR family (NCBI ptt file) -0.29
    19 SO0730 hypothetical protein (NCBI ptt file) -0.29
    20 SO1727 hypothetical protein (NCBI ptt file) -0.29

    Or look for positive cofitness