Negative cofitness for SO2229 from Shewanella oneidensis MR-1

hrpA: ATP-dependent helicase HrpA (NCBI ptt file)
SEED: ATP-dependent RNA helicase HrpA (EC 3.6.4.13)
KEGG: ATP-dependent helicase HrpA

Computing cofitness values with 270 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	SO1946	phoP	transcriptional regulatory protein PhoP (NCBI ptt file)	-0.35
2	SO3294	xseA	exodeoxyribonuclease VII, large subunit (NCBI ptt file)	-0.33
3	SO4251		transcriptional regulator, TetR family (NCBI ptt file)	-0.30
4	SO3743		transcriptional regulator, TetR family (NCBI ptt file)	-0.30
5	SO4032		conserved hypothetical protein (NCBI ptt file)	-0.29
6	SO2744		DNA damage response helicase (yejH or radD) (from data)	-0.29
7	SO3467	ribBA	3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II, putative (NCBI ptt file)	-0.29
8	SO4364	recG	ATP-dependent DNA helicase RecG (NCBI ptt file)	-0.28
9	SO1724		phosphate ABC transporter, permease protein, putative (NCBI ptt file)	-0.27
10	SO4087		conserved hypothetical protein (NCBI ptt file)	-0.27
11	SO2429	ruvB	Holliday junction DNA helicase RuvB (NCBI ptt file)	-0.26
12	SO2153.1		hypothetical transposase (NCBI ptt file)	-0.26
13	SO1945	phoQ	sensor protein PhoQ (NCBI ptt file)	-0.25
14	SO3135		C4-dicarboxylate transporter, putative (NCBI ptt file)	-0.25
15	SO2984		conserved hypothetical protein (NCBI ptt file)	-0.25
16	SO1732		cold shock domain family protein (NCBI ptt file)	-0.25
17	SO3298		conserved hypothetical protein (NCBI ptt file)	-0.25
18	SO2987		hypothetical protein (NCBI ptt file)	-0.25
19	SO1681		enoyl-CoA hydratase/isomerase family protein (NCBI ptt file)	-0.25
20	SO3352		conserved hypothetical protein TIGR00044 (NCBI ptt file)	-0.25

Or look for positive cofitness