• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for SO2125 from Shewanella oneidensis MR-1

    cheD-1: chemotaxis protein CheD (NCBI ptt file)
    SEED: Chemotaxis protein CheD
    KEGG: chemotaxis protein CheD

    Computing cofitness values with 270 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 SO2432 conserved hypothetical protein TIGR01033 (NCBI ptt file) -0.39
    2 SO2844 exonuclease SbcD, putative (NCBI ptt file) -0.34
    3 SO1192 hypothetical protein (NCBI ptt file) -0.33
    4 SO3667 conserved hypothetical protein (NCBI ptt file) -0.33
    5 SO4716 acetyltransferase, GNAT family (NCBI ptt file) -0.32
    6 SO0555 conserved hypothetical protein (NCBI ptt file) -0.31
    7 SO2075 hypothetical protein (NCBI ptt file) -0.31
    8 SOA0155 conserved domain protein (NCBI ptt file) -0.31
    9 SO_A0081 no description -0.30
    10 SO1961 maa maltose O-acetyltransferase (NCBI ptt file) -0.30
    11 SO1663 napF ferredoxin-type protein NapF (NCBI ptt file) -0.29
    12 SO_A0126 no description -0.29
    13 SO2319 anti-anti-sigma factor, putative (NCBI ptt file) -0.29
    14 SO4609 cytochrome c oxidase subunit III (NCBI ptt file) -0.28
    15 SO_2630 no description -0.28
    16 SO2126 cheB-1 protein-glutamate methylesterase CheB (NCBI ptt file) -0.27
    17 SO4369 acyl carrier protein, putative (NCBI ptt file) -0.27
    18 SO1298.4 hypothetical Na+/H+ antiporter (NCBI ptt file) -0.27
    19 SO1877 bcp bacterioferritin comigratory protein (NCBI ptt file) -0.25
    20 SOA0085 ISSod8, transposase (NCBI ptt file) -0.25

    Or look for positive cofitness