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  • Negative cofitness for SO1921 from Shewanella oneidensis MR-1

    hypothetical protein (NCBI ptt file)
    SEED: FIG01057223: hypothetical protein

    Computing cofitness values with 270 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 SO1072 chitin-binding protein, putative (NCBI ptt file) -0.32
    2 SO4420 peptidase, M23/M37 family (NCBI ptt file) -0.29
    3 SOA0012 umuC umuC protein (NCBI ptt file) -0.27
    4 SOA0010 conserved hypothetical protein (NCBI ptt file) -0.27
    5 SOA0008 hypothetical protein (NCBI ptt file) -0.27
    6 SOA0013 umuD umuD protein (VIMSS) -0.26
    7 SO4068 hypothetical protein (NCBI ptt file) -0.26
    8 SO0181 hypothetical protein (NCBI ptt file) -0.25
    9 SOA0171 hypothetical protein (NCBI ptt file) -0.25
    10 SOA0003 type II restriction endonuclease, putative (NCBI ptt file) -0.25
    11 SOA0172 site-specific recombinase, resolvase family (NCBI ptt file) -0.24
    12 SO0159 hypothetical protein (NCBI ptt file) -0.24
    13 SO2077 acyltransferase domain protein (NCBI ptt file) -0.24
    14 SOA0004 type II DNA modification methyltransferase (NCBI ptt file) -0.24
    15 SOA0002 type II restriction-modification system activator, putative (NCBI ptt file) -0.24
    16 SO_A0174 hypothetical protein (NCBI) -0.24
    17 SO1382 hypothetical protein (NCBI ptt file) -0.24
    18 SO0497 hypothetical protein (NCBI ptt file) -0.23
    19 SO_A0009 hypothetical protein (NCBI) -0.23
    20 SO_A0007 hypothetical protein (NCBI) -0.23

    Or look for positive cofitness