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  • Negative cofitness for SO1811 from Shewanella oneidensis MR-1

    conserved hypothetical protein (NCBI ptt file)
    SEED: Membrane protein YcjF
    KEGG: putative membrane protein

    Computing cofitness values with 270 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 SO2118 SpoIIAA family protein (NCBI ptt file) -0.35
    2 SO1434 methyl-accepting chemotaxis protein (NCBI ptt file) -0.32
    3 SO2119 response regulator (NCBI ptt file) -0.32
    4 SO1193 secD-1 protein-export membrane protein SecD (NCBI ptt file) -0.32
    5 SO2544 sensor histidine kinase/response regulator (NCBI ptt file) -0.30
    6 SO2501 radical activating enzyme (NCBI ptt file) -0.29
    7 SO4163 hslU heat shock protein HslVU, ATPase subunit HslU (NCBI ptt file) -0.29
    8 SO_A0081 no description -0.28
    9 SO1609 syd syd protein (NCBI ptt file) -0.28
    10 SO0783 hypothetical protein (NCBI ptt file) -0.28
    11 SO_2320 no description -0.28
    12 SO0802 MATE efflux family protein (NCBI ptt file) -0.28
    13 SO1281 hypothetical protein (NCBI ptt file) -0.28
    14 SO4274 undecaprenol kinase, putative (NCBI ptt file) -0.27
    15 SO2133 hypothetical protein (NCBI ptt file) -0.27
    16 SO3871 thiol:disulfide interchange protein, DsbA family (NCBI ptt file) -0.26
    17 SO1698 hypothetical protein (NCBI ptt file) -0.26
    18 SO2839 hypothetical protein (NCBI ptt file) -0.26
    19 SO2766 conserved hypothetical protein (NCBI ptt file) -0.26
    20 SO_1211 no description -0.26

    Or look for positive cofitness