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  • Negative cofitness for SO1392 from Shewanella oneidensis MR-1

    conserved hypothetical protein (NCBI ptt file)
    SEED: HPP domain-containing protein

    Computing cofitness values with 283 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 SO2037 site-specific recombinase, phage integrase family (NCBI ptt file) -0.29
    2 SO3097.2 hypothetical sodium/proline symporter (NCBI ptt file) -0.27
    3 SO0085 hypothetical protein (NCBI ptt file) -0.26
    4 SO1040 hypothetical protein (NCBI ptt file) -0.26
    5 SO0107 fdhD formate dehydrogenase accessory protein FdhD (NCBI ptt file) -0.25
    6 SO0269 thioredoxin, putative (NCBI ptt file) -0.25
    7 SO0975 hypothetical protein (NCBI ptt file) -0.24
    8 SO0466.1 hypothetical protein (NCBI ptt file) -0.24
    9 SO1841 hypothetical protein (NCBI ptt file) -0.23
    10 SO_A0080 hypothetical protein (NCBI) -0.23
    11 SO_t083 tRNA-Arg-8 tRNA-Arg (RefSeq) -0.23
    12 SO_3143 no description -0.23
    13 SO1264 hypothetical oxidoreductase (NCBI ptt file) -0.22
    14 SO1478 methylase, putative (NCBI ptt file) -0.22
    15 SO0822 outer membrane efflux family protein (NCBI ptt file) -0.21
    16 SO3665 ABC transporter, ATP-binding/permease protein, putative (NCBI ptt file) -0.21
    17 SO0208.1 putative transposase (NCBI ptt file) -0.21
    18 SO3867 transcriptional regulator, Cro/CI family (NCBI ptt file) -0.20
    19 SO2540 response regulator (NCBI ptt file) -0.20
    20 SO3549 conserved hypothetical protein (NCBI ptt file) -0.20

    Or look for positive cofitness