Negative cofitness for SO1234 from Shewanella oneidensis MR-1

torE: WARNINIG torE protein (NCBI ptt file)
KEGG: periplasmic nitrate reductase NapE

Computing cofitness values with 283 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 SO2995 hypothetical protein (NCBI ptt file) -0.25
2 SO2374 transcriptional regulator, LysR family (NCBI ptt file) -0.25
3 SO3002 conserved hypothetical protein (NCBI ptt file) -0.25
4 SO4019 hypothetical protein (NCBI ptt file) -0.24
5 SOA0130 ISSod4, transposase (NCBI ptt file) -0.24
6 SO3565 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase (NCBI ptt file) -0.23
7 SO1027 hypothetical protein (NCBI ptt file) -0.23
8 SO0675 prophage MuSo1, major head subunit, putative (NCBI ptt file) -0.23
9 SO3743 transcriptional regulator, TetR family (NCBI ptt file) -0.22
10 SO4187 hypothetical protein (NCBI ptt file) -0.22
11 SO0652 prophage MuSo1, positive regulator of late transcription, putative (NCBI ptt file) -0.22
12 SO1489 hypothetical protein (NCBI ptt file) -0.21
13 SO0003 trmE tRNA modification GTPase TrmE (NCBI ptt file) -0.21
14 SO4052 transcriptional regulator, MarR family (NCBI ptt file) -0.21
15 SO0486 nosD copper ABC transporter, periplasmic copper-binding protein (NCBI ptt file) -0.21
16 SO2055 esterase, putative (NCBI ptt file) -0.21
17 SO3938 conserved hypothetical protein (NCBI ptt file) -0.21
18 SO4007 predicted chromosome partitioning protein (with smc-like SO4008) (from data) -0.20
19 SO2972 hypothetical protein (NCBI ptt file) -0.20
20 SO0627 putative 2'-5' RNA ligase (NCBI ptt file) -0.20

Or look for positive cofitness