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  • Negative cofitness for SO0864 from Shewanella oneidensis MR-1

    transcriptional regulator, LuxR family (NCBI ptt file)
    SEED: Response regulator, LuxR family

    Computing cofitness values with 270 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 SO0844 hypothetical protein (NCBI ptt file) -0.34
    2 SO3367 conserved hypothetical protein TIGR00091 (NCBI ptt file) -0.34
    3 SO0415 type IV pilus biogenesis protein PilC (NCBI ptt file) -0.30
    4 SO3504 conserved hypothetical protein (NCBI ptt file) -0.29
    5 SO0799 conserved hypothetical protein (NCBI ptt file) -0.28
    6 SO1192 hypothetical protein (NCBI ptt file) -0.28
    7 SO2095 hypothetical protein (NCBI ptt file) -0.28
    8 SO3871 thiol:disulfide interchange protein, DsbA family (NCBI ptt file) -0.28
    9 SO1771.2 hypothetical catalase (NCBI ptt file) -0.27
    10 SO4017 transglycosylase, Slt family (NCBI ptt file) -0.27
    11 SO2133 hypothetical protein (NCBI ptt file) -0.27
    12 SO_1527 no description -0.26
    13 SO1717 hypothetical protein (NCBI ptt file) -0.26
    14 SO_2630 no description -0.26
    15 SO3603 secretion protein, HlyD family (NCBI ptt file) -0.26
    16 SO2126 cheB-1 protein-glutamate methylesterase CheB (NCBI ptt file) -0.26
    17 SO4026 hypothetical protein (NCBI ptt file) -0.25
    18 SO1374 acetyltransferase, GNAT family (NCBI ptt file) -0.25
    19 SO3777 hypothetical protein (NCBI ptt file) -0.25
    20 SOA0108 hypothetical protein (NCBI ptt file) -0.25

    Or look for positive cofitness