Negative cofitness for SO0854 from Shewanella oneidensis MR-1

type IV pilin, putative (NCBI ptt file)
SEED: Type IV pilus biogenesis protein PilE
KEGG: type IV pilus assembly protein PilE

Computing cofitness values with 270 experiments...

Genes with the strongest negative cofitness:

Rank	Hit	Name	Description	Cofit
1	SO2969		prophage LambdaSo, holin, putative (NCBI ptt file)	-0.28
2	SO1850		DnaJ domain protein (NCBI ptt file)	-0.26
3	SO0549		chemotaxis protein CheY/response regulator receiver domain protein (NCBI ptt file)	-0.26
4	SO1287		conserved hypothetical protein (NCBI ptt file)	-0.25
5	SO4185		hypothetical protein (NCBI ptt file)	-0.24
6	SO2089	hypA	hydrogenase expression/formation protein HypA (NCBI ptt file)	-0.23
7	SO2387		conserved hypothetical protein (NCBI ptt file)	-0.22
8	SO_3141		no description	-0.21
9	SO3409		OsmC/Ohr family protein (NCBI ptt file)	-0.21
10	SO2012	apt	adenine phosphoribosyltransferase (NCBI ptt file)	-0.21
11	SO1008		transposase, putative (NCBI ptt file)	-0.20
12	SO4189		conserved hypothetical protein (NCBI ptt file)	-0.20
13	SO3595		sensor protein RstB, putative (NCBI ptt file)	-0.20
14	SO3787		hypothetical protein (NCBI ptt file)	-0.20
15	SO0364		conserved hypothetical protein (NCBI ptt file)	-0.20
16	SO0716		monoheme cytochrome c, putative (NCBI ptt file)	-0.19
17	SO4579		fimbrial protein, putative (NCBI ptt file)	-0.19
18	SO3794		conserved domain protein (NCBI ptt file)	-0.19
19	SO2724		protease, putative (NCBI ptt file)	-0.19
20	SO3799	asnC	regulatory protein AsnC (NCBI ptt file)	-0.19

Or look for positive cofitness