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  • Negative cofitness for SO0850 from Shewanella oneidensis MR-1

    hypothetical protein (NCBI ptt file)
    SEED: Type IV fimbrial biogenesis protein PilX

    Computing cofitness values with 270 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 SO3923 thiH protein, putative (NCBI ptt file) -0.30
    2 SO3549 conserved hypothetical protein (NCBI ptt file) -0.27
    3 SO2683 hypothetical protein (NCBI ptt file) -0.27
    4 SO_3046 no description -0.26
    5 SO2647 cytosolic long-chain acyl-CoA thioester hydrolase family protein (NCBI ptt file) -0.25
    6 SO1055 sensory box protein (NCBI ptt file) -0.25
    7 SO1841 hypothetical protein (NCBI ptt file) -0.24
    8 SO3097.2 hypothetical sodium/proline symporter (NCBI ptt file) -0.24
    9 SOA0059 conserved hypothetical protein (NCBI ptt file) -0.24
    10 SO4643 hypothetical protein (NCBI ptt file) -0.23
    11 SO3755 hypothetical protein (NCBI ptt file) -0.23
    12 SO0403 hypothetical protein (NCBI ptt file) -0.23
    13 SO2841 hypothetical protein (NCBI ptt file) -0.23
    14 SO3168 DnaJ domain protein (NCBI ptt file) -0.22
    15 SO1448 site-specific recombinase, phage integrase family (NCBI ptt file) -0.22
    16 SO0404 hypothetical protein (NCBI ptt file) -0.22
    17 SO4307 conserved hypothetical protein (NCBI ptt file) -0.22
    18 SO3972 hypothetical transposase (NCBI ptt file) -0.22
    19 SO0401 alcohol dehydrogenase, zinc-containing (NCBI ptt file) -0.22
    20 SO4631 greB transcription elongation factor GreB (NCBI ptt file) -0.21

    Or look for positive cofitness