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  • Negative cofitness for SO0639 from Shewanella oneidensis MR-1

    Collagenase family (NCBI ptt file)
    SEED: Microbial collagenase, secreted (EC 3.4.24.3)
    KEGG: microbial collagenase

    Computing cofitness values with 270 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 SO4068 hypothetical protein (NCBI ptt file) -0.33
    2 SO_A0158 hypothetical protein (NCBI) -0.33
    3 SO3993 hypothetical protein (NCBI ptt file) -0.30
    4 SO1137 conserved hypothetical protein (NCBI ptt file) -0.29
    5 SO2596 conserved hypothetical protein (NCBI ptt file) -0.26
    6 SO3874 transcriptional regulator, LysR family (NCBI ptt file) -0.26
    7 SO1443 conserved hypothetical protein (NCBI ptt file) -0.26
    8 SO2002 hypothetical protein (NCBI ptt file) -0.25
    9 SO_A0055 no description -0.24
    10 SO_0911 no description -0.24
    11 SO1715 conserved hypothetical protein (NCBI ptt file) -0.24
    12 SO1479 hypothetical protein (NCBI ptt file) -0.24
    13 SO0148 hypothetical protein (NCBI ptt file) -0.24
    14 SO2889 sensory box histidine kinase (NCBI ptt file) -0.24
    15 SO3994 hypothetical protein (NCBI ptt file) -0.24
    16 SOA0051 hypothetical protein (NCBI ptt file) -0.24
    17 SO2384 site-specific recombinase, phage integrase family (NCBI ptt file) -0.23
    18 SO0126 conserved hypothetical protein (NCBI ptt file) -0.23
    19 SO3524 pilE type IV pilus biogenesis protein PilE (NCBI ptt file) -0.23
    20 SO4274 undecaprenol kinase, putative (NCBI ptt file) -0.23

    Or look for positive cofitness