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  • Negative cofitness for Rru_A3427 from Rhodospirillum rubrum S1H

    Tryptophan synthase, beta chain (NCBI)
    SEED: Tryptophan synthase beta chain (EC 4.2.1.20)
    KEGG: tryptophan synthase beta chain

    Computing cofitness values with 60 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Rru_A1720 Carboxymuconolactone decarboxylase (NCBI) -0.37
    2 Rru_A1995 Divalent cation transporter (NCBI) -0.34
    3 Rru_A2297 Ribokinase (NCBI) -0.32
    4 Rru_A2767 ribonuclease G (RNase G) (NCBI) -0.31
    5 Rru_A0722 Sigma-24 (FecI) (NCBI) -0.31
    6 Rru_A3406 Carboxylesterase (NCBI) -0.31
    7 Rru_A1840 Penicillin amidase (NCBI) -0.30
    8 Rru_A3048 Glycine dehydrogenase (decarboxylating) (NCBI) -0.30
    9 Rru_A3092 Parallel beta-helix repeat (NCBI) -0.28
    10 Rru_A3105 glycosyl transferases group 1 (NCBI) -0.28
    11 Rru_A3506 putative branched-chain amino acid transport system substrate-binding protein (NCBI) -0.28
    12 Rru_A1912 Short-chain dehydrogenase/reductase SDR (NCBI) -0.28
    13 Rru_A2036 hypothetical protein (NCBI) -0.28
    14 Rru_A2863 Transcriptional Regulator, TetR family (NCBI) -0.27
    15 Rru_A2302 Periplasmic binding protein/LacI transcriptional regulator (NCBI) -0.27
    16 Rru_A3754 hypothetical protein (NCBI) -0.27
    17 Rru_A2207 hypothetical protein (NCBI) -0.27
    18 Rru_A1936 ErfK/YbiS/YcfS/YnhG (NCBI) -0.27
    19 Rru_A3101 hypothetical protein (NCBI) -0.27
    20 Rru_A0303 hypothetical protein (NCBI) -0.26

    Or look for positive cofitness