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  • Negative cofitness for Rru_A3393 from Rhodospirillum rubrum S1H

    Penicillin-binding protein 1A (NCBI)
    SEED: Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)

    Computing cofitness values with 60 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Rru_A3753 hypothetical protein (NCBI) -0.73
    2 Rru_A3040 Aminotransferase, class V (NCBI) -0.65
    3 Rru_A1847 Transglutaminase-like (NCBI) -0.64
    4 Rru_A2856 putative flagellar protein FlaF (NCBI) -0.62
    5 Rru_A0590 Binding-protein-dependent transport systems inner membrane component (NCBI) -0.61
    6 Rru_A0845 TonB-dependent siderophore receptor (NCBI) -0.58
    7 Rru_A0479 Radical SAM (NCBI) -0.57
    8 Rru_A1131 Aminotransferase, class IV (NCBI) -0.56
    9 Rru_A1736 hypothetical protein (NCBI) -0.54
    10 Rru_A2067 Acyltransferase 3 (NCBI) -0.54
    11 Rru_A0183 Cold-shock DNA-binding domain protein (NCBI) -0.54
    12 Rru_A1465 hypothetical protein (NCBI) -0.54
    13 Rru_A0500 extracellular solute-binding protein, family 1 (NCBI) -0.53
    14 Rru_A3274 hypothetical protein (NCBI) -0.53
    15 Rru_A3132 Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain (NCBI) -0.52
    16 Rru_A3724 ABC transporter component (NCBI) -0.52
    17 Rru_A0254 NAD-dependent epimerase/dehydratase (NCBI) -0.52
    18 Rru_A3364 hypothetical protein (NCBI) -0.52
    19 Rru_A1614 hypothetical protein (NCBI) -0.52
    20 Rru_A3302 Glucan 1,4-alpha-glucosidase (NCBI) -0.52

    Or look for positive cofitness