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  • Negative cofitness for Rru_A3349 from Rhodospirillum rubrum S1H

    transcription activator, effector binding (NCBI)
    SEED: Bacterial transcription activator, effector binding protein

    Computing cofitness values with 60 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Rru_A2297 Ribokinase (NCBI) -0.68
    2 Rru_A1313 Membrane protein involved in aromatic hydrocarbon degradation (NCBI) -0.63
    3 Rru_A0762 Fe-S oxidoreductase (NCBI) -0.56
    4 Rru_A2863 Transcriptional Regulator, TetR family (NCBI) -0.56
    5 Rru_A3724 ABC transporter component (NCBI) -0.52
    6 Rru_A3274 hypothetical protein (NCBI) -0.51
    7 Rru_A0318 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) -0.50
    8 Rru_A3408 Glycosyl transferase, family 2 (NCBI) -0.50
    9 Rru_A0300 Aminotransferase, class IV (NCBI) -0.49
    10 Rru_A1466 Transcriptional Regulator, LysR family (NCBI) -0.47
    11 Rru_A1315 Sterol-binding (NCBI) -0.46
    12 Rru_A2945 hypothetical protein (NCBI) -0.46
    13 Rru_A0967 Carbon-monoxide dehydrogenase (NCBI) -0.45
    14 Rru_A1731 hypothetical protein (NCBI) -0.45
    15 Rru_A0647 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit (NCBI) -0.45
    16 Rru_A3032 hypothetical protein (NCBI) -0.44
    17 Rru_A3295 circadian clock protein KaiC (NCBI) -0.44
    18 Rru_A3443 PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) -0.44
    19 Rru_A3602 Smr protein/MutS2-like (NCBI) -0.44
    20 Rru_A3066 NAD(P)H dehydrogenase (quinone) (NCBI) -0.44

    Or look for positive cofitness