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  • Negative cofitness for Rru_A3054 from Rhodospirillum rubrum S1H

    Ribonuclease H (NCBI)
    SEED: Ribonuclease HI (EC 3.1.26.4)
    KEGG: ribonuclease HI

    Computing cofitness values with 60 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Rru_A3302 Glucan 1,4-alpha-glucosidase (NCBI) -0.62
    2 Rru_A3737 KAP P-loop (NCBI) -0.61
    3 Rru_A2536 hypothetical protein (NCBI) -0.54
    4 Rru_A0507 Alpha amylase, catalytic region (NCBI) -0.52
    5 Rru_A1467 Acetate kinase (NCBI) -0.52
    6 Rru_A2912 Propeptide, PepSY amd peptidase M4 (NCBI) -0.51
    7 Rru_A0758 Transcriptional Regulator, AraC family (NCBI) -0.50
    8 Rru_A3553 hypothetical protein (NCBI) -0.49
    9 Rru_A2653 hypothetical protein (NCBI) -0.45
    10 Rru_A0845 TonB-dependent siderophore receptor (NCBI) -0.45
    11 Rru_A1177 chemotaxis sensory transducer (NCBI) -0.44
    12 Rru_A2856 putative flagellar protein FlaF (NCBI) -0.44
    13 Rru_A2641 hypothetical protein (NCBI) -0.44
    14 Rru_A2889 hypothetical protein (NCBI) -0.43
    15 Rru_B0042 hypothetical protein (NCBI) -0.42
    16 Rru_A3753 hypothetical protein (NCBI) -0.42
    17 Rru_A2924 Glycosyl transferase, family 2 (NCBI) -0.41
    18 Rru_A1696 permease (NCBI) -0.41
    19 Rru_A1918 Binding-protein-dependent transport systems inner membrane component (NCBI) -0.41
    20 Rru_A3108 NAD-dependent epimerase/dehydratase (NCBI) -0.41

    Or look for positive cofitness