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  • Negative cofitness for Rru_A3041 from Rhodospirillum rubrum S1H

    regulatory protein GntR (NCBI)
    SEED: Transcriptional regulator, GntR family domain

    Computing cofitness values with 60 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Rru_A0285 Aldehyde dehydrogenase (NCBI) -0.72
    2 Rru_A1711 Endoribonuclease L-PSP (NCBI) -0.60
    3 Rru_A3499 hypothetical protein (NCBI) -0.56
    4 Rru_A1696 permease (NCBI) -0.56
    5 Rru_A1264 Short-chain dehydrogenase/reductase SDR (NCBI) -0.56
    6 Rru_A3168 Binding-protein-dependent transport systems inner membrane component (NCBI) -0.53
    7 Rru_A0170 CRISPR-associated protein, CT1974 (NCBI) -0.51
    8 Rru_A2101 Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) -0.51
    9 Rru_A0775 2OG-Fe(II) oxygenase (NCBI) -0.51
    10 Rru_A0234 hypothetical protein (NCBI) -0.50
    11 Rru_A1466 Transcriptional Regulator, LysR family (NCBI) -0.50
    12 Rru_A0655 Transcriptional Regulator, AsnC family (NCBI) -0.50
    13 Rru_A1402 CheW protein (NCBI) -0.50
    14 Rru_A2299 inner-membrane translocator (NCBI) -0.50
    15 Rru_A3166 extracellular solute-binding protein, family 5 (NCBI) -0.50
    16 Rru_A0724 Protein of unknown function DUF1365 (NCBI) -0.49
    17 Rru_A2539 hypothetical protein (NCBI) -0.49
    18 Rru_A2109 ATP-dependent Clp protease ATP-binding subunit ClpA (NCBI) -0.49
    19 Rru_A3668 hypothetical protein (NCBI) -0.49
    20 Rru_A1868 Peptidase M23B (NCBI) -0.49

    Or look for positive cofitness