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  • Negative cofitness for Rru_A2895 from Rhodospirillum rubrum S1H

    Twin-arginine translocation pathway signal (NCBI)
    SEED: Manganese ABC transporter, periplasmic-binding protein SitA
    KEGG: manganese/iron transport system substrate-binding protein

    Computing cofitness values with 60 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Rru_A2657 AsmA (NCBI) -0.56
    2 Rru_A3412 Amidohydrolase (NCBI) -0.52
    3 Rru_A3504 putative phenylacetate-CoA ligase (NCBI) -0.52
    4 Rru_A1785 membrane protein-like (NCBI) -0.50
    5 Rru_A1976 Phenylacetate--CoA ligase (NCBI) -0.49
    6 Rru_A1905 ABC transporter component (NCBI) -0.49
    7 Rru_A3234 processing peptidase (NCBI) -0.47
    8 Rru_A0566 hypothetical protein (NCBI) -0.45
    9 Rru_A2356 extracellular solute-binding protein, family 5 (NCBI) -0.44
    10 Rru_A0542 Surface presentation of antigens (SPOA) protein (NCBI) -0.44
    11 Rru_A1337 ABC transporter component (NCBI) -0.43
    12 Rru_A2897 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (NCBI) -0.43
    13 Rru_A1729 Protein of unknown function DUF502 (NCBI) -0.41
    14 Rru_A3532 UspA (NCBI) -0.41
    15 Rru_A2647 hypothetical protein (NCBI) -0.40
    16 Rru_A2503 Hydroxypyruvate isomerase (NCBI) -0.39
    17 Rru_A0223 Protein of unknown function DUF344 (NCBI) -0.39
    18 Rru_A3204 C-terminal processing peptidase (NCBI) -0.39
    19 Rru_A3172 Lysine exporter protein (LYSE/YGGA) (NCBI) -0.39
    20 Rru_A0970 hypothetical protein (NCBI) -0.38

    Or look for positive cofitness