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  • Negative cofitness for Rru_A2540 from Rhodospirillum rubrum S1H

    Major facilitator superfamily protein MFS_1 (NCBI)
    SEED: Arabinose efflux permease
    KEGG: MFS transporter, DHA1 family, arabinose polymer transporter

    Computing cofitness values with 60 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Rru_A2130 Lysine exporter protein (LYSE/YGGA) (NCBI) -0.60
    2 Rru_AR0042 5S ribosomal RNA (NCBI) -0.56
    3 Rru_A1629 hypothetical protein (NCBI) -0.55
    4 Rru_A1168 Hydrogenase expression/synthesis, HypA (NCBI) -0.55
    5 Rru_B0019 O-methyltransferase, family 3 (NCBI) -0.54
    6 Rru_A3591 hypothetical protein (NCBI) -0.48
    7 Rru_A3398 Transcriptional Regulator, XRE family (NCBI) -0.48
    8 Rru_A3663 NAD-glutamate dehydrogenase (NCBI) -0.48
    9 Rru_A3070 Transcriptional Regulator, AsnC family (NCBI) -0.48
    10 Rru_A2650 hypothetical protein (NCBI) -0.47
    11 Rru_A3225 hypothetical protein (NCBI) -0.47
    12 Rru_A0550 TPR repeat (NCBI) -0.46
    13 Rru_A2254 hypothetical protein (NCBI) -0.46
    14 Rru_A0883 Sigma-24 (FecI) (NCBI) -0.46
    15 Rru_A2996 Cobalamin (vitamin B12) biosynthesis CbiD protein (NCBI) -0.46
    16 Rru_A1110 Sigma 32 (RpoH) (NCBI) -0.45
    17 Rru_A0535 Protein of unknown function DUF6, transmembrane (NCBI) -0.45
    18 Rru_A2386 hypothetical protein (NCBI) -0.45
    19 Rru_A0700 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain (NCBI) -0.45
    20 Rru_A0180 hypothetical protein (NCBI) -0.44

    Or look for positive cofitness