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  • Negative cofitness for Rru_A2273 from Rhodospirillum rubrum S1H

    ABC transporter component (NCBI)
    SEED: Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3)
    KEGG: peptide/nickel transport system ATP-binding protein

    Computing cofitness values with 60 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Rru_A0808 type II secretion system protein E (NCBI) -0.61
    2 Rru_A2918 hypothetical protein (NCBI) -0.60
    3 Rru_A1293 chemotaxis sensory transducer (NCBI) -0.53
    4 Rru_A3289 Diacylglycerol kinase, catalytic region (NCBI) -0.53
    5 Rru_A0658 Transcriptional Regulator, LysR family (NCBI) -0.53
    6 Rru_A1269 Rv0623-like transcription factor (NCBI) -0.52
    7 Rru_A0126 ABC transporter component (NCBI) -0.50
    8 Rru_A0527 hypothetical protein (NCBI) -0.50
    9 Rru_A3183 diheme cytochrome c (NCBI) -0.50
    10 Rru_A2278 Transposase IS66 (NCBI) -0.49
    11 Rru_A3348 Protein of unknown function DUF195 (NCBI) -0.48
    12 Rru_A3260 hypothetical protein (NCBI) -0.48
    13 Rru_A0685 Protein of unknown function DUF81 (NCBI) -0.47
    14 Rru_A3089 hypothetical protein (NCBI) -0.47
    15 Rru_A1288 Molybdenum cofactor synthesis protein (NCBI) -0.47
    16 Rru_A1574 Glyoxalase/bleomycin resistance protein/dioxygenase (NCBI) -0.47
    17 Rru_A2923 hypothetical protein (NCBI) -0.46
    18 Rru_A3142 Type III effector Hrp-dependent outers (NCBI) -0.46
    19 Rru_A2120 Acyl transferase region (NCBI) -0.46
    20 Rru_A2044 hypothetical protein (NCBI) -0.45

    Or look for positive cofitness