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  • Negative cofitness for Rru_A2002 from Rhodospirillum rubrum S1H

    D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (NCBI)
    SEED: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
    KEGG: gyoxylate/hydroxypyruvate reductase A

    Computing cofitness values with 60 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Rru_A3006 Protein of unknown function DUF839 (NCBI) -0.61
    2 Rru_A1724 ThiJ/PfpI (NCBI) -0.48
    3 Rru_A3799 DNA-formamidopyrimidine glycosylase (NCBI) -0.47
    4 Rru_A1955 Phosphoribosyltransferase (NCBI) -0.46
    5 Rru_A1707 hypothetical protein (NCBI) -0.45
    6 Rru_A0863 ABC transporter, transmembrane region (NCBI) -0.45
    7 Rru_A2590 hypothetical protein (NCBI) -0.43
    8 Rru_A1741 Phage integrase (NCBI) -0.43
    9 Rru_A0579 Glycosyl transferase, group 1 (NCBI) -0.42
    10 Rru_A2565 no description -0.42
    11 Rru_A0482 Protein of unknown function DUF1311 (NCBI) -0.42
    12 Rru_A3456 hypothetical protein (NCBI) -0.42
    13 Rru_A1729 Protein of unknown function DUF502 (NCBI) -0.42
    14 Rru_A2448 Protein of unknown function DUF330 (NCBI) -0.42
    15 Rru_A1967 Peptidase S8 and S53, subtilisin, kexin, sedolisin (NCBI) -0.42
    16 Rru_A3042 hypothetical protein (NCBI) -0.41
    17 Rru_A0935 NAD-dependent epimerase/dehydratase (NCBI) -0.41
    18 Rru_A3149 Protein of unknown function DUF214 (NCBI) -0.41
    19 Rru_A1507 short-chain dehydrogenase/reductase SDR (NCBI) -0.41
    20 Rru_A3196 Plasmid stabilization system (NCBI) -0.41

    Or look for positive cofitness