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  • Negative cofitness for Rru_A2001 from Rhodospirillum rubrum S1H

    hypothetical protein (NCBI)
    SEED: Type I secretion system, outer membrane component LapE

    Computing cofitness values with 60 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Rru_A0590 Binding-protein-dependent transport systems inner membrane component (NCBI) -0.70
    2 Rru_A3686 Alanine dehydrogenase and pyridine nucleotide transhydrogenase (NCBI) -0.62
    3 Rru_A0383 SH3 domain protein (NCBI) -0.59
    4 Rru_A3753 hypothetical protein (NCBI) -0.58
    5 Rru_A0300 Aminotransferase, class IV (NCBI) -0.57
    6 Rru_A0934 hypothetical protein (NCBI) -0.55
    7 Rru_A0223 Protein of unknown function DUF344 (NCBI) -0.55
    8 Rru_A3316 Phage integrase (NCBI) -0.55
    9 Rru_A0350 Helix-turn-helix protein, CopG (NCBI) -0.54
    10 Rru_A3220 TonB-dependent receptor (NCBI) -0.54
    11 Rru_A1465 hypothetical protein (NCBI) -0.54
    12 Rru_B0026 SapC (NCBI) -0.54
    13 Rru_A1995 Divalent cation transporter (NCBI) -0.53
    14 Rru_A3443 PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) -0.53
    15 Rru_A2021 Endonuclease/exonuclease/phosphatase (NCBI) -0.52
    16 Rru_A2863 Transcriptional Regulator, TetR family (NCBI) -0.52
    17 Rru_A3002 Nicotinamidase (NCBI) -0.51
    18 Rru_A3682 Cytochrome B561 (NCBI) -0.51
    19 Rru_A3602 Smr protein/MutS2-like (NCBI) -0.50
    20 Rru_A3677 Tripartite ATP-independent periplasmic transporter, DctQ component (NCBI) -0.50

    Or look for positive cofitness