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  • Negative cofitness for Rru_A1959 from Rhodospirillum rubrum S1H

    Radical SAM (NCBI)
    SEED: Queuosine Biosynthesis QueE Radical SAM

    Computing cofitness values with 60 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Rru_A0120 chemotaxis sensory transducer (NCBI) -0.57
    2 Rru_A2391 hypothetical protein (NCBI) -0.52
    3 Rru_A3252 dTDP-glucose 4,6-dehydratase (NCBI) -0.50
    4 Rru_A1966 Coenzyme F390 synthetase-like (NCBI) -0.50
    5 Rru_A0112 hypothetical protein (NCBI) -0.50
    6 Rru_A0254 NAD-dependent epimerase/dehydratase (NCBI) -0.50
    7 Rru_A3717 Glycosyl transferase WecB/TagA/CpsF (NCBI) -0.48
    8 Rru_A3646 Protein tyrosine phosphatase (NCBI) -0.47
    9 Rru_A0543 hypothetical protein (NCBI) -0.47
    10 Rru_A1846 Twin-arginine translocation pathway signal (NCBI) -0.46
    11 Rru_A0318 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) -0.46
    12 Rru_A2126 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase (NCBI) -0.46
    13 Rru_A2820 Multi-sensor Hybrid Histidine Kinase (NCBI) -0.46
    14 Rru_A1492 hypothetical protein (NCBI) -0.46
    15 Rru_A0535 Protein of unknown function DUF6, transmembrane (NCBI) -0.45
    16 Rru_A3305 ABC transporter component (NCBI) -0.45
    17 Rru_A0788 ABC transporter component (NCBI) -0.45
    18 Rru_A0046 Protein of unknown function DUF523 (NCBI) -0.45
    19 Rru_A3218 hypothetical protein (NCBI) -0.45
    20 Rru_A3718 hypothetical protein (NCBI) -0.45

    Or look for positive cofitness