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  • Negative cofitness for Rru_A1954 from Rhodospirillum rubrum S1H

    Secretion protein HlyD (NCBI)
    SEED: possible FusE-MFP/HlyD family membrane fusion protein

    Computing cofitness values with 60 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Rru_A3220 TonB-dependent receptor (NCBI) -0.59
    2 Rru_A0303 hypothetical protein (NCBI) -0.56
    3 Rru_A3024 Prolyl 4-hydroxylase, alpha subunit (NCBI) -0.56
    4 Rru_A0879 Transcriptional Regulator, AraC family (NCBI) -0.55
    5 Rru_A2817 Phasin (NCBI) -0.53
    6 Rru_A3033 hypothetical protein (NCBI) -0.51
    7 Rru_A2076 chemotaxis sensory transducer (NCBI) -0.51
    8 Rru_A3316 Phage integrase (NCBI) -0.51
    9 Rru_B0012 DNA polymerase, beta-like region (NCBI) -0.51
    10 Rru_A0387 Antibiotic biosynthesis monooxygenase (NCBI) -0.50
    11 Rru_A2808 periplasmic protein-probably involved in high-affinity Fe2+ transport (NCBI) -0.50
    12 Rru_A2299 inner-membrane translocator (NCBI) -0.50
    13 Rru_A2863 Transcriptional Regulator, TetR family (NCBI) -0.49
    14 Rru_A1712 chemotaxis sensory transducer (NCBI) -0.49
    15 Rru_A0300 Aminotransferase, class IV (NCBI) -0.49
    16 Rru_A3032 hypothetical protein (NCBI) -0.49
    17 Rru_A1988 GCN5-related N-acetyltransferase (NCBI) -0.48
    18 Rru_A1479 hypothetical protein (NCBI) -0.48
    19 Rru_A2003 Radical SAM (NCBI) -0.48
    20 Rru_A0724 Protein of unknown function DUF1365 (NCBI) -0.47

    Or look for positive cofitness