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  • Negative cofitness for Rru_A1413 from Rhodospirillum rubrum S1H

    Protein of unknown function DUF224, cysteine-rich region (NCBI)
    SEED: Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE
    KEGG: glycolate oxidase

    Computing cofitness values with 60 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Rru_A3418 Transcriptional Regulator, TetR family (NCBI) -0.58
    2 Rru_A3510 ABC transporter component (NCBI) -0.55
    3 Rru_A3718 hypothetical protein (NCBI) -0.54
    4 Rru_A0502 hypothetical protein (NCBI) -0.53
    5 Rru_A0318 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) -0.51
    6 Rru_A3756 PAS/PAC Sensor Hybrid Histidine Kinase (NCBI) -0.51
    7 Rru_A1736 hypothetical protein (NCBI) -0.50
    8 Rru_A3404 trkA-C domain protein (NCBI) -0.49
    9 Rru_A1791 ABC-2 transporter component (NCBI) -0.48
    10 Rru_A0383 SH3 domain protein (NCBI) -0.48
    11 Rru_A1431 Transcriptional Regulator, Crp/Fnr family (NCBI) -0.48
    12 Rru_A0479 Radical SAM (NCBI) -0.47
    13 Rru_A0509 hypothetical protein (NCBI) -0.47
    14 Rru_A3252 dTDP-glucose 4,6-dehydratase (NCBI) -0.47
    15 Rru_A1053 chemotaxis sensory transducer (NCBI) -0.47
    16 Rru_A0523 Two component CheB methylesterase (NCBI) -0.46
    17 Rru_A3296 PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) -0.46
    18 Rru_A0545 Flagellar FliF M-ring protein (NCBI) -0.45
    19 Rru_A0120 chemotaxis sensory transducer (NCBI) -0.45
    20 Rru_A0982 ABC transporter component (NCBI) -0.44

    Or look for positive cofitness