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  • Negative cofitness for Rru_A1407 from Rhodospirillum rubrum S1H

    CheD, stimulates methylation of MCP proteins (NCBI)
    SEED: Chemotaxis protein CheD
    KEGG: chemotaxis protein CheD

    Computing cofitness values with 60 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Rru_A0878 ABC transporter component (NCBI) -0.52
    2 Rru_A0323 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) -0.52
    3 Rru_A1256 hypothetical protein (NCBI) -0.48
    4 Rru_A3032 hypothetical protein (NCBI) -0.46
    5 Rru_A3686 Alanine dehydrogenase and pyridine nucleotide transhydrogenase (NCBI) -0.45
    6 Rru_A2856 putative flagellar protein FlaF (NCBI) -0.44
    7 Rru_A0990 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI) -0.43
    8 Rru_A1400 CheW protein (NCBI) -0.42
    9 Rru_A1175 CsbD-like (NCBI) -0.42
    10 Rru_B0004 hypothetical protein (NCBI) -0.41
    11 Rru_A0507 Alpha amylase, catalytic region (NCBI) -0.41
    12 Rru_A2961 hypothetical protein (NCBI) -0.40
    13 Rru_A0064 squalene-phytoene synthase (NCBI) -0.39
    14 Rru_A0257 Protein of unknown function DUF898 (NCBI) -0.39
    15 Rru_A2297 Ribokinase (NCBI) -0.38
    16 Rru_A1951 Transcriptional Regulator, AraC family (NCBI) -0.38
    17 Rru_A2536 hypothetical protein (NCBI) -0.38
    18 Rru_A2610 hypothetical protein (NCBI) -0.38
    19 Rru_A0350 Helix-turn-helix protein, CopG (NCBI) -0.38
    20 Rru_A0521 CheA Signal Transduction Histidine Kinases (STHK) (NCBI) -0.37

    Or look for positive cofitness